Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLVLIGGGYGNMRVLHRLLPNQLPDDVSITLIDRNPYHCLKTEYYALAAGTISDHHIRVSFPEHP---RLDVQYGDITSIDIVQKQVLFQDREPISYDDAIIGLGCEDKYHNVPGAPEFTYSIQTIDQSRETYQKLN----------NLSANATVAIVGAGLSGVELASELRESRD-----------DLNIILFDRGNLILSSFPERLSKYVQKWFEEHGVRIINRANITKVEEG-VVY-N--HDDPISADAIVWTAGIQPNKVVRDLDVEKDAQGRIVLTPHHNLPGDEHLYVVGDCASLP-------HAPSAQLAEAQAEQIVQILQKRWNGEALPESMPQFKLKGVLGSLGKKAGFGLVADRPLIGRVPRMLKSGLLWMYKHHNG
4NWZ Chain:A ((3-387))KPSIVILGAGYGGIVAALGLQKRLNYNEADITLVNKNDYHYITTELHQPAAGTMHHDQARVGIKELIDEKKIKFVKDTVVAIDREQQKVTLQNG-ELHYDYLVVGLGSEPETFGIEGLREHAFSINSINSVRIIRQHIEYQFAKFAAEPERTDYLTIVVGGAGFTGIEFVGELADRMPELCAEYDVDPKLVRIINVEAAPTVLPGFDPALVNYAMDVLGGKGVEFKIGTPIKRCTPEGVVIEVDGEEEEIKAATVVWTGGVRGNSIVEKSGFET-MRGRIKVDPYLRAPGHENIFIVGDCALIINEENNRPYPPTAQIAIQHGENVAANLAALIRGGSMTPFKP--HIRGTVASLGRNDAIGIVGGRKVYGHAASWLKKLIDMRYLYLI-


General information:
TITO was launched using:
RESULT:

Template: 4NWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1941 -42162 -21.72 -120.46
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -21.72
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_4NWZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NWZ-query.scw
PDB file : Tito_Scwrl_4NWZ.pdb: