Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKHQNPSKRLLRLSIKYLLAAAAVVLT----YFAVIYILFSLAGTSYRSAAHVLLFAVVFLVLGLCFEPFERLMIHSFTFFKTGKRLFILLAGIVQLLFLWMTAHTTDQLISDIWLSTTEEMIVAAVFLILDKCNSALPS
1IXD Chain:A ((1-104))GSSGSSGLAMPPGNSHGLEVGSLAEVKENPPFYGVIRWIGQPPGLNEV-------------LAGLELED-ECAGCTDGTF--RGTRYFTCALK--KALFVKLKSCRPDSRFASLQPSGPSSG------------------


General information:
TITO was launched using:
RESULT:

Template: 1IXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 379 -21326 -56.27 -213.26
target 2D structure prediction score : 0.16
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -56.27
2D Compatibility (Sec. Struct. Predict.) : 0.16
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.246

(partial model without unconserved sides chains):
PDB file : Tito_1IXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IXD-query.scw
PDB file : Tito_Scwrl_1IXD.pdb: