Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKRFSLIMMTGLLFGLTSPAFAAEKTETEAKAPANVAVLLDASGSMAKRIDG------VSKFNSAKKEISKFASSLPEGTQVKMSVFGSEGNNKNSGKVQSCEAIRNVYGFQSFNEQSFLNSLNTIG---PTGWTPIAKALNEAKSSFDQLDAKGEKVVYLLTDGEETCGG-NPIKTAKELQKDNITVNVIGFDYK-----------------EGYKGQLNAIAKVGGGEYFPAYTQKDVEKIFTQQSLMLSK
4RCK Chain:A ((17-216))--------------------------------EHRDMMLVVDLSGSMAEEDMKTSNGDFVDRLTAVKQVVSDFIDQ-RKGDRLGLVLFGDHA--------------YLQTPLT-FDRNTVREQLDRTVLNLVGQRTAIGEGLGLATKTFIES-NAPQRTIILLSDGANTAGVLEPLEAAQLAKDNHAKIYTVGIGAGEMQVRGFFGKQTVNTARDLDEDTLTKIATMTGGQYFRARNADELAEIYQTID-----


General information:
TITO was launched using:
RESULT:

Template: 4RCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 571 41991 73.54 242.72
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 73.54
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_4RCK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RCK-query.scw
PDB file : Tito_Scwrl_4RCK.pdb: