Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------MHKEIAK---ELLLLAG-------GKNNIISISHCTTRLRFDVKDETKIDIHAIENLQGVQGTFF--------RYGLFQII------FGAGVVNKIYKEV------VHVWETAP--------SEEPVHQKKASRKLNPAAAFAKTLSDIFVPIIPAI-TASGLLMGLIGMIKVFHW-FAAGSPWIK-----MLDLVSSTAFILLPILVGFSAARQFGSNPYLGAVI------AGLLTHPDLLDPSMLGSKTPSSLDIWGLHIPMMGYQGSM----IPILLSVFVMS--KI--EKLLKSIVPK---------------------------------------SLDVVIIPFITVMVTGC----LALIVMNPAASIIGQIMTQSIVYIYDHAG------IAAGA-LFGGIYSTIVLSGLHHSF--------------YAIEATLLANPHVGVNFLVPIWSMAN---------VAQGGAGLAVFLKTKQS----------------------SLKKIALPASLTAFL--GIVEPIVFGVNLKLIRPFIG-AA-IGG-AI-GGAYVVAVQVVANSYGLTGIPMISIVLPFGAANFVHY--MIGFLIAAVSAFIATLFLGFKEETE-------
4U3E Chain:A ((12-670))SGLVGSHMKVQYSFEREFEELMSDLLSKYGYEMFQMDGLGDQLDVVKFTEDFVRRGIIESTIDANANVRVTNISTYFIEISKPHTYLYSLYRIWQKMKEMFGKGVADEFVEAQINGAVYLHDRHHAALMPYCFAYTLKPIVEKGLPFIKTIKSEPAKHLSTFIQHVIQFVMFASNQSSGAVGLPDFFVWMWYFVKKDLKEGIIPRDKLDWYIEQHFQILTYSLNQPIRTTQSPYTNFTYLDRNYIKAIFEGERYPDGSLITDHVEDIIALQKHYWEWVSRERERQMFTFPVLTASLLYKDGKFLDEDSARFINKINMKWQDTNWYISDSIDAVASCEKLKGRMNSIGGSDLNIGSFKVITVNLPRIALESGGDREKYLQILRHRVQLIKKALAAVREIIKERISEGLLPLYENGLMLLNRQYGTIGVTGVWESASIMGLTTEDIDGLKYTEEGEVFVDNVLDTIREEAEKGYHEYGFTFNIEQVPAEKAAVTLAQKDRFLFGEKQPFEIYSNQWVPLMANTDVLNRIRYSGKWDKKVSGGAILHINLGESFKTEEESFNMVKMIADMGVMYFAFNTKISVCEDGHAFYGER----CPVCGKAKVDEYMRIVGYLVPVSAFNKERREIEYPRRQFYDSLTIR


General information:
TITO was launched using:
RESULT:

Template: 4U3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2075 -56715 -27.33 -124.65
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -27.33
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.138

(partial model without unconserved sides chains):
PDB file : Tito_4U3E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U3E-query.scw
PDB file : Tito_Scwrl_4U3E.pdb: