Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLRTEKEKMAAGELYNSE-DQQLLLERKHARQLIRQYNET-PEDDAVRTKLLKELLGSVGDQVTILPTFRCDYGYHIHIGDHTFVNFDCVILDVCEVRIGCHCLIAPGVHIYTAGHPLDPIERKSGKEFGKPVTIGDQVWIGGRAVINPGVTIGDNAVIASGSVVTKDVPANTVVGGNPARILKQL
4EGG Chain:F ((2-184))---TEKEKMLAEKWYDANFDQTLINERLRAKVICFALNHTNPVATMMRKVLIDALFQTTTDNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIPPHSLAVGNPCKVVRKI


General information:
TITO was launched using:
RESULT:

Template: 4EGG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 941 -15642 -16.62 -86.42
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain F : 0.84

3D Compatibility (PKB) : -16.62
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.651

(partial model without unconserved sides chains):
PDB file : Tito_4EGG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EGG-query.scw
PDB file : Tito_Scwrl_4EGG.pdb: