Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MVYQTKRDVPVTLMIVFLIL------------------LIQADAIVP----FVLGNMRVSGWIIFILLTLLNGLIIW-------------SFIDLKYVLKE-HHLIIKAGLIKHQIPYENIDKVVQKKKLWSGFRLIGSRHA---------ITIYYQGGWGHAVISPQKSEEFIHKLKEKNS-NIIIFTKSK
4OMV Chain:A ((0-202))AMLLYTKKDDIYSDIVRMILLIKGANAKIVDVSKEENSKHLEELNIITPNGNIPTLSTDDFAVYRLSVIIEAIEDLYPFPPMFPVFPKQRANARILLEYVNKTFLQNIIKLQSPDLDEKQANEIKMLMQRDIISTYKKIVSERAQNINVLTLIITFVFYYFIKLKISIPTKDKNIIKEIKELLSEPNFIKTIKA


General information:
TITO was launched using:
RESULT:

Template: 4OMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 460 -23425 -50.92 -160.45
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -50.92
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.282

(partial model without unconserved sides chains):
PDB file : Tito_4OMV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OMV-query.scw
PDB file : Tito_Scwrl_4OMV.pdb: