Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVRHLGLRDFRSWACVDL--ELHPGRTVFVGPNGYGKTNLIEALWYSTT--LGSHRVSADLPLIRVGTDRAVIS-TIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPEDLGLVRG-DPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVFDTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAY--------QLLAPESRSASIGYRASMDVTGPSEQSDIDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAW--------------------------------SLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESA---EQVLVTAAVLE-------DIPAGWDARRVHIDVRADDTGSMSVVLP |
| 4UX3 Chain:A ((3-527)) | -YIKRVIIKGFKTYRNETIIDNFSPHQNVIIGSNGSGKSNFFAAIRFVLSDDYSNLKREERQGLIHQGSGGSVMSASVEIVIRRTVGLKKD--DYQLNDRNVTKGDIVRMLETAGFSMNNPYNIVPQGKIVALTNAKDKERLQLLEDVVGAKSFEVKLKASLKKMEETEQKKIQINKEMGELNSKLSEMEQERKELEKYNELERNRKIYQFTLYDRELNEVINQMETSDQLLQRLNDMNTEISGLKNVNKRAFENFKKFNERRKDLAERASELDESKDSIQDLIVKLKQQKVNAVDSTFQKVSENFEAVFERLVPRGTAKLIIHSISVSFNSKQNEQLHVEQLSGGQKTVCAIALILAIQMVDPASFYLFDEIDAALDKQYRTAVATLLKELSKNAQFICTTFRTDMLQVADKFFRVKYENKISTVIEVNREEAIGFIR-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4UX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -55630 for 2543 contacts (-21.9/contact) +
2D Compatibility (PS) -39913 + (NN) -3501 + (LL) 592
1D Compatibility (HY) -7200 + (ID) 2400
Total energy: -108052.0 ( -42.49 by residue)
QMean score : 0.184
|
|
|