Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD |
| 2AHJ Chain:B ((1-211)) | MDGVHDLA--------------GVQGFGKVPHTVNADIGPTFHAEWEHLPYSLMFAGVAELGAFSVDEVRYVVERMEPRHYMMT--PYYERYVIGVATLMVEKGILTQDELESLAG-------------------------------GPFPLSRPSESEGRPAPVETTTFEVGQRVRVRDEYVPGHIRMPAYCRG------RVGTISHRTTEKWPFPDAIGH------------GRNDAGEEPTYHVKFAAEELFGSDTD-GGSVVVDLFEGYLEPA--------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2AHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 10191 for 1496 contacts (6.8/contact) +
2D Compatibility (PS) -22084 + (NN) -9421 + (LL) 4308
1D Compatibility (HY) -800 + (ID) 1600
Total energy: -19406.0 ( -12.97 by residue)
QMean score : 0.028
|
|
|