Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQAGSSVAVIQERQALLARQ----HDAVAEADRELADVLASAHAAMRE--SVRRLDAIAAELDRAVPDQDQLAVDTPMGAREFQTFLVAKQREIVAVVAAAHELDRAKSAVLKRLRAQYTEPAR
1P68 Chain:A ((1-102))
MYGKLNDLLEDLQEVLKNLHKNWHGGKDNLHDVDNHLQNVIEDIHDFMQGGGSGGKLQEM---------------------MKEFQQVLDELNNHLQGGKHTVHHIEQNIKEIFHHLEELVHR---
General information:
TITO was launched using:
RESULT:
Template:
1P68.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17385 for 715 contacts (-24.3/contact) +
2D Compatibility (PS) -10453 + (NN) -5103 + (LL) 1364
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -37677.0 ( -52.70 by residue)
QMean score : 0.699
(partial model without unconserved sides chains):
PDB file :
Tito_1P68.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P68-query.scw
PDB file :
Tito_Scwrl_1P68.pdb
: