Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEHQSLPAPEASTEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKV--GFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKEAKVDVLVSYLPVGSEE-ADKFYAQCAIDAGVAFVNALPVF-IASDPVWAKKFTDARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAYLMKSPPEQLPDDIARAQLEEFIIG |
3C8M Chain:A ((4-173)) | ------------MKTINLSIFGLGNVGLNLLRIIRSFNEEN---------------RLGLKFNVVFVADSLHSYYNERIDIGKVISYKE----------KGSLD--------SL-----------EYESISASEALA-RDFDIVVDATPASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRYEAT--VAGGVPLFSFIDYSVL--PSRIKKFR--------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106016 for 1179 contacts (-89.9/contact) +
2D Compatibility (PS) -17017 + (NN) 2322 + (LL) 11652
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -112159.0 ( -95.13 by residue)
QMean score : 0.414
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