Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTR-AALPAIRPVNHLVV-----DGRVIGRTR-L---------TAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARY-QRLLHPWV----NMAMDTVVAIEPEIVTGIRIVADSRTP
4ZKY Chain:A ((5-142))
---------------------FDAVTAFADAPAAVLSTLNADGAPHLVPVVFAVHVPHVEGQPARIYTAVDAKRKTTRNLRRLANIDR------DSRVSLLVDHYSDDWTQLWWVRADGVATTHHSGDEVATGYALLRAKYHQYERVSLDGPVISVEVSRWASWQ--------
General information:
TITO was launched using:
RESULT:
Template:
4ZKY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59482 for 802 contacts (-74.2/contact) +
2D Compatibility (PS) -13026 + (NN) -5396 + (LL) 1848
1D Compatibility (HY) 800 + (ID) 950
Total energy: -76206.0 ( -95.02 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_4ZKY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZKY-query.scw
PDB file :
Tito_Scwrl_4ZKY.pdb
: