Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGGREEYRAVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRRHRELDGSGTVRGNIKVPAKLVVGSKFSTKMKLF--GLPYRITSRVTALKPNELVEWSHPLGH----RWRWEFESLSPTLTRVTETFDYHAAGAIKNGLKFYEMTGF-AKSNAAGIEATLAKLSDQYARGRA |
| 2D4R Chain:A ((2-147)) | ---------------------------------------------------------------------------PEVRAERYIPAPPERVYRLAKDLEGLKPY-----LKEVESLEVVAREGARTRSRWVAVAMGKKVRWLEEEEWDDENLRNRFFSPEGDFDRYEGTWVFLPEGEG-TRVVLTLTYELTIPIFGGLLRKLVQKLMQENVESLLKGLEERVLAASS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D4R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13322 for 981 contacts (-13.6/contact) +
2D Compatibility (PS) -15064 + (NN) -4490 + (LL) 3720
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -31756.0 ( -32.37 by residue)
QMean score : 0.318
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