Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTRQAAEADLAGKAAQYRPDELARYAQRVMDWLHPDGDLTDTERARKRGITLSNQQYDGMSRLSGYLTPQAR-ATFEAVLAKLAA---PGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGL-RALIASGKLGQHNGLPVSIVVTTTLTDLQTGAGKGFTGGGTLLPMADVIRMTSHAHHYSPASG-RYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQAHHVTAWTSTGRTDITELTLACGP------DNRLAEKGWTTHNNTHGHTEWLPP--PHLDH-------GQPRTNTFHHP-----ERFLHNQDDDDKPD |
| 4N5H Chain:X ((1-315)) | MADEEAMLAKVQASWAQTAARDKARYADE-----------RVPEDVHWETEYRYEQSADPQQTLNLYYPAKRRNATMPTVIDIHGGGWFYGDRNLNRNYCRYLASQGYAVMGMGYRLLPDVDLRGQIQDIFASLRWLSHFGPQRGFDLDHVLLTGDS-----------AGGHLASLVACIQQSAELQELFGVSRVNFNFTLVALVCPVA--EPSKLPEAAGDMSDMAAFYLDKLSGGDQALVD----HLNFSQVVKGLDLPPFMLIGGQNDSFYLQSQALLKVFDANHVTYTTKLWPASAGPHLKHVFNVQHWEWPESIETNLEMLRTFDALSKQQDQAEENE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 916 for 2290 contacts (0.4/contact) +
2D Compatibility (PS) -30246 + (NN) -10707 + (LL) 1108
1D Compatibility (HY) -6400 + (ID) 2700
Total energy: -48029.0 ( -20.97 by residue)
QMean score : 0.227
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