Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGISRRTFGLAAGFGAIGAGGLGGGCSTRSGPTPTPEPASRGVGVVLSHEQFRTDRLVAHAQAAEQAGFRYVWASDHLQPWQDNEGHSMFPWLTLALVGNSTSSILFGTGVTCPIYRYHPATVAQAFASLAILNPGRVFLGLGTGERLNEQAATDTFGNYRERHDRLIEAIVLIRQLWSGERISFTGHYFRTDELKLYDTPAM--PPPIFVAASGPQSATLAGRYGDGWIAQARDIN-DAKLLAAFAAGAQAAGRDPTTLGKRAELFAVVGDDKAAARAADLWRFTAGAV------------DQPNPVEIQRA-AESNPIEK--------VLANWAVGTDPGVHIGAVQAVLDAGAVPFLHFPQDDPITAIDFYRTNVLPELR |
| 1NQK Chain:A ((27-350)) | ----------------------------------------------------VDHGYLQQIAQAADRLGYTGVLIPTGRS--------CEDAWLVAASMIPVTQRLKFLVAL-RPSV-TSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDGVFLDHSERYEASAEFTQVWRRLLQRETVDFNGKHIHVRGAKLLFPAIQQPYPPLYFGGSSDVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAHGRKI---RFGIRLHVIVRETNDEAWQAAERLISHLDDETIAKAQAAFAR-----------DNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYAALGIDSFVLSG-YPHLEEAYRVGELLFPLLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NQK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143692 for 2274 contacts (-63.2/contact) +
2D Compatibility (PS) -30810 + (NN) -14872 + (LL) 1912
1D Compatibility (HY) -2800 + (ID) 2900
Total energy: -193162.0 ( -84.94 by residue)
QMean score : 0.455
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