Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAPKLVIGANGFLGSHVTRQLVADCAPQKGEV--RAMVR-PAAN-TRSID---DLPLTRFHGDVFDTATVAEAMAGCDDVYYCVVDTRAWL--RDPSPLFRTNVAGLRNVLDVATDASLRRFVFTSSYATVGRRRG------------HVATEEDRVDTRKVTPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGGGDWGRTPHGAFIAGAVFGRLPFTM---RGIRLEAVGVDDAARALILAAERGRNGERYLISER-MMPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTGKDTELSLASVRMMRSEADVDHGKAVRELGWQPR--PVEESIREAARFWAAMRTVGKDPAAS |
| 1OC2 Chain:A ((3-329)) | QFKNIIVTGGAGFIGSNFVHYVYN----NHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNY--NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRD-WIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDA--YDHV-T-------D--------RA---G-----HDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQDWW------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149235 for 2589 contacts (-57.6/contact) +
2D Compatibility (PS) -32922 + (NN) -14811 + (LL) 2488
1D Compatibility (HY) -4800 + (ID) 3150
Total energy: -202430.0 ( -78.19 by residue)
QMean score : 0.590
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