Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPFDDPQAELAWMFLQSLCEGGDLDEGFALLSNDFTYWSIVTRTELDKKTFRRAVERRKQVF-EVNIELIRCVNEGETVVVEGHCDGVS--------ADRTRYDSPFVCIFETRDGMIISLREYSDTQSLAEVYPVACATPGRC
2GEY Chain:A ((2-139))
---SMAERKALCLEMVAAWNR-WDLSGIIKHWSPDIVHYSED--NEVSSADMVKLMEGGLKAFPDLQLEVKSIMAEEDRVALRITVTATHQGEFMGVQPTGQRVSWHLVEELRFVDGKVVEHWDVINMRPLLVRLGKLPDVPKV-
General information:
TITO was launched using:
RESULT:
Template:
2GEY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54593 for 840 contacts (-65.0/contact) +
2D Compatibility (PS) -14176 + (NN) -5317 + (LL) 156
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -80030.0 ( -95.27 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_2GEY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GEY-query.scw
PDB file :
Tito_Scwrl_2GEY.pdb
: