Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRSIDVVVEAVVTFAGAAGFAHTLAPLRRGQQDPCFRVPGDGTIWRTSLLPTGPVTARISRAGRDAARCVAWGSGAEEFVDMAPAMLGAADDASDFVPLHPAVAAAHRRLPNLRLGRT-GQVLEALIPAVIEQRVPG-ADAFRSWRLLVSKYGTQAPGPAPPGMRVPPSAEVWRHIPSWEFHRANVDPG---RARAVVGCAQRAASLERLVSLPAARAAEALTSLPGVGVWTAAETTQRVFGDADAVSVGDYHIPKMIGWTLVGRPVDDAGMLELLEPMRPHRHRVVRLLEASGLAREPRRGPRLPVQNIRAL- |
4MB0 Chain:A ((9-261)) | PRYWSLYYREKIIEGMEKGMTAKAGLIAHGRGEAFDYLIGERTI-----------------------------EPAERAMRAAVAKLLLAENP--VVSVNGNVAAL-VPKETIELARALNAKLEINLFYRTEDRVKAIAEELRKYD------------PEIELLGINPT----KRIPGLEHERGKVDENGIWKADVVV------------VPLEDGDRTEALVRM-GKFVITIDLNPLSRSARMADITIVDNIVRAYPRMTELAREMKDYSRGELIRIIEEYDNGKTLNDVLLHIRDRLTKLAEGGIWRKKQLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96653 for 2040 contacts (-47.4/contact) +
2D Compatibility (PS) -26017 + (NN) -3188 + (LL) 3720
1D Compatibility (HY) -8400 + (ID) 2550
Total energy: -133088.0 ( -65.24 by residue)
QMean score : 0.216
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