Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAPKRSSDLFSQVVNSGPGSFLARQLGVPQPETLRRYRAGEPPLTGSLLIGGAGRVVEPLRAALEKDYDLVGNNLGGRWADSFGGLVFDATGITEPAGLKGLHEFFTPVLRNLGRCGRVVVVGGTPEAAASTNERIAQRALEGFTRSLGKELRRGATTALVYLSPDAKPAATGLESTMRFLLSAKSAYVDGQVFSVGADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDV-ESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTAAI-------PLATREVGRRLNSLLQGGQPVDVAEAIAYFASPASNAVTGNVIRVCGQAMIGA |
4I08 Chain:B ((10-246)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-NGKGMALNVTNPESIEAVLKAITDEFGG-VDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIET--TKALNDEQRTATLAQVPAGRL-------GDPREIASAVAFLASPEAAYITGETLHVNG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I08.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130541 for 1964 contacts (-66.5/contact) +
2D Compatibility (PS) -24248 + (NN) -2814 + (LL) 11724
1D Compatibility (HY) -18000 + (ID) 4950
Total energy: -168829.0 ( -85.96 by residue)
QMean score : 0.520
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