Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTIGTRKRVAVVTGASSGIGEATARTLAAQGFHVVAVARRADRITALANQIG-----GTAIV--ADVTDDAAVEALARAL----SRVDVLVNNAGGAKGLQFVADADLEHWRWMWDTNVLGTLRVTRALLPKLIDSG--DGLIVTVTSIAAIEVYDGGAG--YTAAKHAQGALHRTLRGEL--LGKPVRLTEIAPGAVETEFSLVRFDGDQQRADAVYAGMTPLVAADVAEVIGFVATRPSHVNLDQIVIRPRDQASASRRATHPVR
1XG5 Chain:C ((31-276))
------RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGST-SGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRP---------------
General information:
TITO was launched using:
RESULT:
Template:
1XG5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141124 for 1917 contacts (-73.6/contact) +
2D Compatibility (PS) -25110 + (NN) -10194 + (LL) 1540
1D Compatibility (HY) -16400 + (ID) 4250
Total energy: -195538.0 ( -102.00 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_1XG5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XG5-query.scw
PDB file :
Tito_Scwrl_1XG5.pdb
: