Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVNDGVDQMGAEPDIMEFVEQMGGYFESRSLTRLAGRLLGWLLVCDPERQSSEELATALAASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRPNAFAAGERERIRAMAELQDLADVGLRALGDAPPQRSRRLREMRDLLAYMENVVSDALGRYSQRTGEDD
3G3Z Chain:A ((6-98))
----------QLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLAT-EGS-RTQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYAA------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3G3Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27129 for 605 contacts (-44.8/contact) +
2D Compatibility (PS) -9856 + (NN) -1133 + (LL) 4916
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -35452.0 ( -58.60 by residue)
QMean score : 0.289
(partial model without unconserved sides chains):
PDB file :
Tito_3G3Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G3Z-query.scw
PDB file :
Tito_Scwrl_3G3Z.pdb
: