Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGR-------------------------------GRADDTDDVILNRMKVYRDETAPLLEYYRDQ--LKTVDAVGTMDEVFARALRALGK
4QBI Chain:B ((1-213))
MNLVLMGLPGAGKGTQAEKIVEAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLGKDDCERGFLLDGFPRTVAQAEALEEILEDIGRKIDYVIHIDVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQRADDNEETVAKRLEVNMKQMKPLLDFYEQKGYLRNVNGEQDIEKVFADVRELLG-
General information:
TITO was launched using:
RESULT:
Template:
4QBI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55949 for 1320 contacts (-42.4/contact) +
2D Compatibility (PS) -20078 + (NN) -15268 + (LL) 64
1D Compatibility (HY) -18400 + (ID) 4300
Total energy: -113931.0 ( -86.31 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_4QBI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QBI-query.scw
PDB file :
Tito_Scwrl_4QBI.pdb
: