Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHMSIFLSRDNKVIVQ-GITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAYNLEAGHKTRIIGPNCPGIISPG-QSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR--DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL |
| 2YV1 Chain:A ((7-293)) | ----MILLDE-NTKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQN---------VHGVPVFDTVKEAVKETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAE--DVGVKIIGPNTPGIASPKVGKL-GIIPMEVLKEGSVGMVSRSGTLTYEIAHQIKKAGFGVSTCVGIGGDPIVGLRYKEVLDLFEKDDETEAIVMIGEIGGGAEEEAAKFIE-KMKKPVIGYIAGQ-------------------GTAESKMKALEEAGAYVAKNISDIPKLLAGILG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198753 for 2417 contacts (-82.2/contact) +
2D Compatibility (PS) -30621 + (NN) -23946 + (LL) 1604
1D Compatibility (HY) -23200 + (ID) 6600
Total energy: -281516.0 ( -116.47 by residue)
QMean score : 0.704
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