Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVTDDYLANNVDYASGF-KGPLPMPPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVVTDDVIRSLAISQRLLGTREIILLHHTDCGMLTFTDDDFKRAIQDETGIRP---TWSPESYPDAVEDVRQSLRRIEVNPFVTKHTSLRGFVFDVATGKLNEVTP
3LAS Chain:B ((3-166))
MSYFDNFIKANQAYVDLHGTAHLPLKPKTRVAIVTCMDSRLHVAPALGLALGDAHILRNAGGRVTDDVIRSLVISEQQLGTSEIVVLHHTDCGAQTFTNAEFTEQLKRDLAVDAGDQDFLP--FTDIEESVREDIALLKNSPLIPEDIIISGAIYDVDTGRVREVN-
General information:
TITO was launched using:
RESULT:
Template:
3LAS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113261 for 1098 contacts (-103.2/contact) +
2D Compatibility (PS) -16706 + (NN) -1873 + (LL) -64
1D Compatibility (HY) -13600 + (ID) 3250
Total energy: -148754.0 ( -135.48 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_3LAS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LAS-query.scw
PDB file :
Tito_Scwrl_3LAS.pdb
: