Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVCTDVFADVPAVPHVHLGQQADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGADSGAGRLPEAEEITTLAQLLLERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIAGHTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGVEGPPTIELLRNDDVLAGVVRARAHGQLPNMRAIVGFAAETGD-ANGDVLFHARAKLRRKGCDLLVVNAVGEGRAFEVDSNDGWLLASDGTESALQHGSKTLMASRIVDAIVTFLAGCSS |
4QJI Chain:A ((7-234)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHDMAGVKALVTAGGTREPLDPVRFIGNRSSGKQGYAVARVLAQRGADVTLIAGNTAGLIDPAGVEMVHIGSATQLRDAVSKHAPDANVLVMAAAVADFRPAHVAAAKIK----EPSSIDLVRNDDVLAGAVRARADGQLPNMRAIVGFAAETGDANG-DVLFHARAKLERKGCDLLVVN-------------DGWLLSADGTESALEHGSKTLMATRIVDSIAAFLKS--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -137100 for 1704 contacts (-80.5/contact) +
2D Compatibility (PS) -23007 + (NN) -13789 + (LL) 15680
1D Compatibility (HY) -22400 + (ID) 8650
Total energy: -189266.0 ( -111.07 by residue)
QMean score : 0.523
|
|
|