Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVCTDVFADVPAVPHVHLGQQADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGADSGAGRLPEAEEITTLAQLLLERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIAGHTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGVEGPPTIELLRNDDVLAGVVRARAHGQLPNMRAIVGFAAETGD-ANGDVLFHARAKLRRKGCDLLVVNAVGEGRAFEVDSNDGWLLASDGTESALQHGSKTLMASRIVDAIVTFLAGCSS
4QJI Chain:A ((7-234))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHDMAGVKALVTAGGTREPLDPVRFIGNRSSGKQGYAVARVLAQRGADVTLIAGNTAGLIDPAGVEMVHIGSATQLRDAVSKHAPDANVLVMAAAVADFRPAHVAAAKIK----EPSSIDLVRNDDVLAGAVRARADGQLPNMRAIVGFAAETGDANG-DVLFHARAKLERKGCDLLVVN-------------DGWLLSADGTESALEHGSKTLMATRIVDSIAAFLKS---


General information:
TITO was launched using:
RESULT:

Template: 4QJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137100 for 1704 contacts (-80.5/contact) +
2D Compatibility (PS) -23007 + (NN) -13789 + (LL) 15680
1D Compatibility (HY) -22400 + (ID) 8650
Total energy: -189266.0 ( -111.07 by residue)
QMean score : 0.523

(partial model without unconserved sides chains):
PDB file : Tito_4QJI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QJI-query.scw
PDB file : Tito_Scwrl_4QJI.pdb: