Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRNRRGSPARPAARFVRPAIPSALSVALLVCTPGLATADPQTDTIAALIADVAKANQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKDANAAIAAAQHRFDTFAAATYMNGPSVSYLSASSPDEIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVAWSSEGGQGAPPFRMWDPGSGPAGGRAWDGLWDPTLPMIPSANIPGDPIAVVNQVLGISATSAQVTANMGRKFLEQLGILQPTDTGITNAPAGSAQGRIPRVYGRQASEYVIRRGMSQIGVPYSWGGGNAAGPSKGIDSGAGTVGFDCSGLVLYSFAGVGIKLPHYSGSQYNLGRKIPSSQMRRGDVIFYGP-NGSQHVTIYLGNGQMLEAPDVG---LKVRVAPVRTAGMTPYVVRYIEY |
| 2HBW Chain:A ((103-206)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFTQKAMQQ-SNYYLWGGTVG-------------PNYDCSGLMQAAFVSVGIWLPRDAYQQEAFTQAITIDELAPGDLVFFGTPVKATHVGLYLGDGCYIHSSGKAQGRDGIGIDILS-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HBW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59692 for 703 contacts (-84.9/contact) +
2D Compatibility (PS) -10525 + (NN) -1748 + (LL) 24800
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: -55815.0 ( -79.40 by residue)
QMean score : 0.381
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