Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTTQTAKASRRARIERRTRESDIVIELDLDGTGQVAVDTGVPFYDHMLTALGSHASFDLTVRATGDVEIEAHHTIEDTAIALGTALGQALGDKRGIRRFGDAFIPMDETLAHAAVDLSGRPYCVHTGEPDHLQHTTIAGSSVPYHTVINRHVFESLAANARIALHVRVLYGRDPHHITEAQYKAVARALRQAVEPDPRVSGVPSTKGAL
4QNK Chain:C ((5-189))
--------SARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIP----TQRVGT---YDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATESDPRR----------
General information:
TITO was launched using:
RESULT:
Template:
4QNK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119488 for 1579 contacts (-75.7/contact) +
2D Compatibility (PS) -19575 + (NN) -4880 + (LL) 1240
1D Compatibility (HY) -10400 + (ID) 4600
Total energy: -157703.0 ( -99.88 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_4QNK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QNK-query.scw
PDB file :
Tito_Scwrl_4QNK.pdb
: