Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNRQVANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTA---ATSAGSTLGEHHPHLTPL-AHRVVEPTE-AAVLGGHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHA-----GSWPYGLPELPGARDQLRGTRRIAVPGCYPTAALLALFPALAA-DLIEPA-VTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTARTRS--PLSQLRAAYEKAYHAEPFIYLMPEGQLPRTGAVIGSNAAHIAVAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALGWPETDGLSVVGVAP |
| 3DR3 Chain:A ((3-337)) | -------AMLNTLIVGASGYAGAELVTYVNRHPHM-----NITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEW--CGNKLKEANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCE--VSLQPYGVF-THRHQPEIATHLG-----A-DVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHKPLVRLYDK-GVPALKNVVGLPFCDIGFAVQ--GEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236699 for 2803 contacts (-84.4/contact) +
2D Compatibility (PS) -34813 + (NN) -15358 + (LL) 1756
1D Compatibility (HY) -21200 + (ID) 6050
Total energy: -312364.0 ( -111.44 by residue)
QMean score : 0.381
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