Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLVLGGDGTFLRAAELARNASIPVLGVNLGRIGFLAEAEAEAIDAVLEHVVAQDYRVEDRLTLDVVVRQGGRIVNRGWALNEVSLEKGPRLGVLGVVVEIDGRPVSAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFGRPMVTSPEATIAIEIEADGHDALVFCDGRREMLIPAGSRLEVTRCVTSVKWARLDSAPFTDRLVRKFRLPVTGWRGK |
1YT5 Chain:A ((1-255)) | ----MKIAILYREEREK---EGEFLKEKISK-EHEVIE--FG-E--------------A---------NAPGRVTADLIVVVGGDGTVLKAAKKAA-DGTPMVGFKAGRLGFLTSYTLDEIDRFLEDLRNWNFREETRWFIQIESEL-----GNHLALNDVTLERDLSGKMVEIEVEVEHHSSMWFFADGVVISTPTGSTAYSLSIGGPIIFPECEVLEISPIAPQFFLTRSVVIPSNFKVVVESQ---RDINMLVDGVLTGK---TKRIEVKKSRRYVRILRPPEYDYVTVIRDKLGYGR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192446 for 2133 contacts (-90.2/contact) +
2D Compatibility (PS) -27923 + (NN) -11277 + (LL) 2572
1D Compatibility (HY) -14800 + (ID) 3300
Total energy: -247174.0 ( -115.88 by residue)
QMean score : 0.431
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