Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MASDLYLGYRNDDADTPFGKFF----KPEMAPLPQHVVVALQHGPQAGMALLAFDDAASIVDEGYQQTENGYGILGDGSMQVSVRTDMPGVTPAMWAWWFGW-HGSDTRRYKLWHPRAHLSARWK---DGDQDSGAG----------------RRGAQRYVGRWSMISEYIGSTKLGAAIQFVEPAAMGLPDDSDDTVSICARLGSA--------DAPVDAGWFVHQVRST-PGGSEMRSRFWMGGPHIAVRKAPEVASKAVRPIASKLIGVSESTARN---------LLVYCAQEMNHLAGFLA-------DLWESFGDE------------------------------------------------ |
| 4CI2 Chain:B ((71-451)) | MINFDTSLPTSHMYLG---SDMEEFHGRTLHDDDSCQVIPVLPHVMVMLIPGQTLPLQLF-HPQEVSMVRNLIQK-DRTFAVLAYSN--VREREAHFGTTAEIYAYREEQEYGIETVKVKAIGRQRFKVLEIRTQSDGIQQAKVQILPERVLPSTMSAVQLQSLSRRHIRAFRQWWQKYQKRKFHCASLTSWPPWLYSLYDAETLMERVKRQLHEWDENLKDESLPTNPIDFSYRVAACLPIDDALRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLSLCGPMAAYVNPHGYIHETLTVYKACNLNLSGRPSTEHSWFPGYAWTIAQCRICGNHMGWKFTATKKDMSPQKFWGLTRSALLPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23122 for 1806 contacts (-12.8/contact) +
2D Compatibility (PS) -27298 + (NN) 4594 + (LL) 636
1D Compatibility (HY) -4800 + (ID) 2400
Total energy: -52390.0 ( -29.01 by residue)
QMean score : 0.054
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