Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLSRTSTGRVIL--VPTQLRFDRWFLPLA---VPLGLGPKNSELWVGAGSLHVKMGWAFAADIPLTSITKAEATNARVYAAGVHFGFGRWLVNGSRKGL-VALTID----PPEQAKMWKKSMTVRELWVSVTDPDALVTACTAK
3WTT Chain:A ((1-119))
GELVRTDSPNFLCSVLPTHWRCNK-TLPIAFKVVAKGDVPDGTLVTVMAGN-----DENYSAE---LRNATAAMKNQVARFNDLRF------VGRSGRGKSFTLTITVFTNPPQVATYH------RAIKITVDGPREPRR-----
General information:
TITO was launched using:
RESULT:
Template:
3WTT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42398 for 728 contacts (-58.2/contact) +
2D Compatibility (PS) -11791 + (NN) -3992 + (LL) 2312
1D Compatibility (HY) -3200 + (ID) 1550
Total energy: -60619.0 ( -83.27 by residue)
QMean score : 0.232
(partial model without unconserved sides chains):
PDB file :
Tito_3WTT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WTT-query.scw
PDB file :
Tito_Scwrl_3WTT.pdb
: