Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGL----GDVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHL-SDGFTAAAAAKAPSLAWNRDDG-LQDMLVRKAFR-R-AITRPTHFVPTTEGFTAAARAGLGWGMFPEKLAASPLADGSFVRVCD--IHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYRGQQRRRRPG |
| 2H98 Chain:A ((89-302)) | ---------------------------------------------------------------------------------------------SQTLRIGYVSSLLYGLLPEIIYLFRQQNPEIHIELIECGTKDQINALKQGKIDLGFGRLKITDPAIRRIMLHKEQLKLAIHKHHHLNQFAATGVHLSQIIDEPMLLYPVSQKPNFATFIQSLFTELGLVPSKLTEIREIQLALGLVAAGEGVCIVPASAMDIGVKNLLYIPILDDDAYSPISLAVRNMD-HSNYIPKILACVQEVFATHHIRPLI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94875 for 1625 contacts (-58.4/contact) +
2D Compatibility (PS) -21552 + (NN) -1059 + (LL) 7976
1D Compatibility (HY) -7200 + (ID) 1000
Total energy: -117710.0 ( -72.44 by residue)
QMean score : 0.453
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