Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------MYSGVVSRTNIEIDDE------LVAAAQRMYRLDSKRS--AVDLALRRLVGEPL----------------GRDEAL-ALQGSGFDFSNDEIESFSDTD----------RKLADES
1FJG Chain:K ((11-129))
KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGL-----QVKSIVDDTPVPHNGCRPKKKFRKAS
General information:
TITO was launched using:
RESULT:
Template:
1FJG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14825 for 465 contacts (-31.9/contact) +
2D Compatibility (PS) -7940 + (NN) -1648 + (LL) -128
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -28341.0 ( -60.95 by residue)
QMean score : 0.283
(partial model without unconserved sides chains):
PDB file :
Tito_1FJG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FJG-query.scw
PDB file :
Tito_Scwrl_1FJG.pdb
: