Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGGSSRRYPPELRERAVRMVAEIR-GQHDSEW----AAISEVARLLGVGCAE----------------TVRKWVRQAQVDAGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR-
1UG7 Chain:A ((1-128))
GSSGSSG-MSEVTRSLLQRWGASLRRGADFDSWGQLVEAIDEYQILARHLQKEAQAQHNNSEFTEEQKKTIGKIATCLELRSAALQSTQSQEEFKLEDLKKLEPILKNILTYNKEFP-FDVQPISGPSSG
General information:
TITO was launched using:
RESULT:
Template:
1UG7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -635 for 718 contacts (-0.9/contact) +
2D Compatibility (PS) -11478 + (NN) -5064 + (LL) 244
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: -20633.0 ( -28.74 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_1UG7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UG7-query.scw
PDB file :
Tito_Scwrl_1UG7.pdb
: