Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALEVLGGWPVPAAAAAVIGPAGVL-ATHG----------DTARVFALASVTKPLVARAAQVAVEEGVVNLDTPAG---P-------PGSTVRHLLAHTSGLAMHSD-----------------QALARPGTRRMYSNYGFTVLAESVQRESGIEFGRYLTEAVCEPLGMVTTRLDGG------------------------PAAAGFGATSTVADLAVFAGDLLRPSTVSAQMHADATTVQFPGLDGVLPGYGVQRPNDWGLGFEIRNSKSP-------------------HWTGECNSTRTFGHFGQ--SGGFIWVDPKADLALVVLTARDFGDWALDLWPAISDAVLAEYT |
| 4NET Chain:A ((17-346)) | -NFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKKAVNSSTIFELGSVSKLFTATAGGYAKNKGKISFDDTPGKYWKELKNTPIDQVNLLQLATYTSGNLALQFPDEVKTDQQVLTFFKDWKPKNSIGEYRQYSNPSIGLFGKVVALSMNKPFDQVLEKTIFPALGLKHSYVNVPKTQMQNYAFGYNQENQPIRVNPGPLGAPAYGVKSTLPDMLSFIHANLNPQKYPADIQRAINETHQGRY--------QVNTMYQALGWEEFSYPATLQTLLDSNSEQIVMKPNKVTAISKEPSVKMYHKTG-NRFGTYVVFIPKENIGLVMLTNKRIPNE----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140653 for 2045 contacts (-68.8/contact) +
2D Compatibility (PS) -26568 + (NN) -13898 + (LL) 1640
1D Compatibility (HY) -10800 + (ID) 2650
Total energy: -192929.0 ( -94.34 by residue)
QMean score : 0.398
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