Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAGPDRAHTSITLVAYAVP----EPGWSAVIPAFNASEQGRGVQVITSYGASADQSRGVA---DGKPADLVNFSVEPDIARLVKAGKVDK--DW-DAD-A----TKGIPFG-SVVTFVVRAGNPK-NIRDWDDLLRPGI--EVITPSPLSSGSAKWNLLAPYAAKSDGGRNNQAGIDFVNTLVNEHVKLRPGSGREATDVFVQGSGDVLISYENEAIATERAGKPVQHVTPPQ------TFKIENPLAVVATSTHLGAATAFRNFQYTVQAQKLWAQ-AGFRPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSITKIYLRATG |
| 4R6Y Chain:A ((3-274)) | ------------------------------------------------------ESVVTVYSIDGLHDGDNSWYQVQFDAFTKA-TGITVRYVEG--GGGVVVERLAKERTNPQADVLVTAP-PFIQRAAAEKLLANFNTDTASAIPDANNLY-SPLVKNYLSFIYNSKLLKTAPASWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHS--FG--SKDAGFAYLGKL-QANNVGPSASTGKLTALVNKGEIYVANGDLQMNLAQMERNPNVKIFWPANDKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVT---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66511 for 2018 contacts (-33.0/contact) +
2D Compatibility (PS) -27286 + (NN) -12309 + (LL) 5452
1D Compatibility (HY) -11200 + (ID) 2000
Total energy: -113854.0 ( -56.42 by residue)
QMean score : 0.401
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