Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQHQRPDPMGPGSPRASARRPEPDPMGEPWWSRAVFYQVYPRSFADSNGDGVGDLDGLASRLDHLQQLGVDAIWINPVTVSPMADHGYDVADPRDIDPLFGGMPAFERLVAAAHRQGIKVTMDVVPNHTSSAHPWFQAALADLPGSPARDRYFFRDGRGPDGSLPPNNWESVFGGPAWTRVREPDGNPGQWYLHLFDTEQPDLNWDNPEILDDFEKTLRFWLDRGVDGFRIDVAHGMAKPPGLPDSPDLGIEVLHHRDDDPRFNHPNVHAIHRDIRTVIDEYPGAVTVGEVWVHDNARWAEYL--RPDELHLGFNFRLARTE----------FDAAEIRDAVANSLAAAALQNATPTWTLANHDVGREVSRYGGGEIGLRR--AKAMAVVMLALPGVVFLYNGQELGLPDVDLPDEVLQD----------PTWERSGRTE----------RGRDGCRVPIPWSGNIPPFGFSTCPDTWLPMPPEWAALTAEKQRADAGSTLSFFRLALRLRRERNEFDG----DVDWLAAPDDALIFRRHGGG----LVCALNAAERPLALPAGEPILASAPLTDATLPPNAAAWLV |
| 4GIA Chain:B ((3-524)) | ---------------------------GAPWWKSAVFYQVYPRSFKDTNGDGIGDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVVINHSSDQHEWFKSSRAS-KDNPYRDYYFWRDGK--DGH-EPNNYPSFFGGSAW----EKDPVTGQYYLHYLGRQQPDLNWDTPKLREELYAMLRFWLDKGVSGMRFDTVATYSKTPGF---PDLTPEQMKNF-AEAYTQGPNLHRYLQEMHEKVFDHYDAVTAGEIFGAPLNQVPLFIDSRRKELDMAFTFDLIRYDRALDRWHTIPRTLADFRQTI-DKVDAIAGEYGWNTFFLGNHDNPRAVSHFGDDRPQWREASAKALATVTLTQRGTPFIFQGDELGM--TNYPFKTLQDFDDIEVKGFFQDYVETGKATAEELLTNVALTSRDNARTPFQWDDSANA-GFTTGK-PWLKVNPNYTEINAAREIGDPKSVYSFYRNLISIRHETPALSTGSYRDID--PSNADVYAYTRSQDGETYLVVVNFKAEPRSFTLPDGMHI-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152063 for 3972 contacts (-38.3/contact) +
2D Compatibility (PS) -53278 + (NN) -47261 + (LL) 1988
1D Compatibility (HY) -34800 + (ID) 9500
Total energy: -294914.0 ( -74.25 by residue)
QMean score : 0.568
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