Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEVATWLEVPLPPG---VLRWQQDHGRHLIDDALKVVEQASLRAGPPTVHSEIV-PAAAVPTLVDMS--KDAVLMVVGCLGSGRWPGRLLGSVSSGLLRHAHCPVVIIHDEDSVMPHPQQAPVLVGVDGSSAS-------ELATAIAFDEASRR-NVDLVALHAWSDVDVSEWPGID---WPATQSMAEQVLAERLAGWQERYPNVAITRVVVRDQPARQLVQRS--EEAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARESLT |
4R2K Chain:A ((15-316)) | ---MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDFSYEMTTLLSPDERTAMRQGVISQRTAWIREQAKYYL-----EAGVPIEIKVVWHNRPFEAIIQEVIAGSHDLVLKMAHQADRLEAVIFTPTDWHLLRKCPSPVWMVKDQPW----PEGGKALVAVNLASEEPYHNALNEKLVKETLQLAEQVNHTEVHLVGAYPVTPINIAIELPEFDPSVYNDAIRGQHLLAMKALRQKFSIDEKVTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGLSAAFLGNTAEQVIDHLRCDLLVIKPD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R2K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155213 for 2176 contacts (-71.3/contact) +
2D Compatibility (PS) -30902 + (NN) -21700 + (LL) 1196
1D Compatibility (HY) -8000 + (ID) 2050
Total energy: -216669.0 ( -99.57 by residue)
QMean score : 0.454
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