Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRPLHAFEVVATRHLAPHMVRVVLGGSG--FDTFVPSDFTDSYIKLVFVDDDVDVGRL--PR-PLT-LDSFAD---LPTAKRPPVRTMTVRHVDAAAREIAVDIVLH---------GEHGVAGPWAAGAQRGQPIYLMGPGGAYAPDPAADWHLLAGDESAIPAIAAALEALPP----DAIGRAFIEVAGPDDEIG---LT----APDAVEVNWVYRGGRADLVPEDRAGDHAP--LIEAVTTTAWLPGQVHVFIHGEAQAVMHNLRPYVRNERGVDAKWASSISGYWRRGRTEEMFRKWKKELAEAEAGTH |
| 4U9U Chain:A ((3-280)) | ---VKKWECTVISNDNKATFIKELKLAIPDGESVPFRA----GGYIQIEAPAHHVKYADFDVPEKYRGDWDKFNLFRYESKVDEPIIRAYSMANYPEEFGIIMLNVRIATPPPNNPNVP-PGQMSSYIWSLKAGDKCTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTG-FIHNVLYENYLKDHEAPEDCEYYMCGPPM-MNAAVINMLKN-LGVE-EENILLDDFG------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125274 for 1979 contacts (-63.3/contact) +
2D Compatibility (PS) -27213 + (NN) -13574 + (LL) 2700
1D Compatibility (HY) -10800 + (ID) 1400
Total energy: -175561.0 ( -88.71 by residue)
QMean score : 0.379
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