Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVD--IGAVAADYTMVAILDSAS-----------------------------------NQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVV-GKVPDCINSGKYIEKVDG---LAAAVNVHATPTVRVNGT----E-YEWS-TPAALVAKIKEIVGDVPGIDSAAATATS |
| 2IN3 Chain:A ((6-213)) | ----------------------------------------------------------------------------EKPVLWYIADPMCSWCWGFAP----VIENIRQEYSAFLTVKIMPG----GTNTPLLPEKRAQILHHWHSVHITTGQPFTFENALPEGFIYDTEPACRGVVSVSLIEPEKVFPFFAAIQR--AFYVGQ-EDVAQLAILKKLAVDLGIPESRFTPVFQSDEAKQRTLAGFQRVAQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTWLQQHG----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IN3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100435 for 1165 contacts (-86.2/contact) +
2D Compatibility (PS) -16566 + (NN) -3368 + (LL) 4352
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -121217.0 ( -104.05 by residue)
QMean score : 0.518
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