Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTARPLSELVERGWAAALEPVADQVAHMGQFLRAEIAAGRRYLPAGSNVLRAFTFPFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADL-GYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP
3FCF Chain:A ((55-221))
----------------------------------------------------------DVKVVILGQDPYHGPNQAHGLCFSVQRPVPP-PPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWK--
General information:
TITO was launched using:
RESULT:
Template:
3FCF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83216 for 1282 contacts (-64.9/contact) +
2D Compatibility (PS) -18291 + (NN) -13555 + (LL) 4864
1D Compatibility (HY) -14000 + (ID) 3850
Total energy: -128048.0 ( -99.88 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_3FCF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FCF-query.scw
PDB file :
Tito_Scwrl_3FCF.pdb
: