Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLQRGAGQYFAGKRCFVTGAASGIGRATALRLAAQGAELYLTDRDRDGLAQTVCDARALGAQVPEHRVLDVSDYQDVAAFAADIHARHPSMDVVLNIAGVSAWGTVDQLTHDQWSRMVAINLMGPIHVIETLVPPMVAAGRG-GHLVNVSSAAGLVGLPWHAAYSASKYGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDRDDPRVNRWVERFSGHAVTPEKAADKILAGVTRNRYLVYTSADIRALYAFKRYAWWPYTLVMRRVNVFFTRALRPGP |
1W4Z Chain:B ((30-247)) | ---------------LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVR---------------EHY------TEEAFDRITARVPIGRYV---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134237 for 1721 contacts (-78.0/contact) +
2D Compatibility (PS) -22407 + (NN) -4811 + (LL) 5340
1D Compatibility (HY) -11200 + (ID) 3800
Total energy: -171115.0 ( -99.43 by residue)
QMean score : 0.548
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