Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSFEGKVAVITGAGSGIGRALALNLSEKRAKLALSDVDTDGLAKTVR--LAQALGAQVKSDRLDVAEREAVLAHADAVVAHFGTVHQVYNNAGIAYNGNVDKSEFKDIERIIDVDFWGVVNGTKAFLPHVIASGDGHIVNISSLFGLIAVPGQSAYNAAKFAVRGFTEALRQEMLVARHPVKVTCVHPGGIKTAVARNATVADGEDQQTFA-EFFDRR---LALHSPEMAAKTIVNGVAKGQARVVVGLEAKAVDVLARIMGSSYQRLVAAGVAKFFPWAK |
2ZTV Chain:C ((2-236)) | ---LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALE--TAGQGITANAICPGWVRTPLVEKQISA-GVDQETAARELLSEKQPSLQFVTPEQLGGTAV---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZTV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94405 for 1849 contacts (-51.1/contact) +
2D Compatibility (PS) -24142 + (NN) -8746 + (LL) 4432
1D Compatibility (HY) -10000 + (ID) 3900
Total energy: -136761.0 ( -73.96 by residue)
QMean score : 0.468
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