Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPD-------H--PKIKSISKQFEKTAEDPRFRFFGNVVVGE---------HVQP-GELSERYDAVIYAVGAQSDRML-NIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKR-KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPTP----GLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGP--TGVIGTNKKDAQDTVDTLIKNLGNAKEGAECKSFPEDHADQVADWLAARQPKLVTSAHWQVIDAFERAAGEPHGRPRVKLASLAELLRIGLG |
| 3AB1 Chain:A ((13-330)) | -DMRDLTIIGGGPTGIFAAFQCGMN-------NISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG-AFEPRKLPQLGNIDHLTGSSVYYAVKSVE-------DFKGKRVVIVGGGDSALDWTVGLIK--------------------NA-ASVTLVHRGHEFQGH---------------------G------------------KTAHEVERAR------ANGTIDVYLETEVASIEESNGVLTRVHLRS--------------SDGSKWTVEADRLLILIGFKSNLGPLARWDLELY-ENALVVDSHMKTS-VDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKPG------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AB1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155196 for 2370 contacts (-65.5/contact) +
2D Compatibility (PS) -31057 + (NN) -16565 + (LL) 9952
1D Compatibility (HY) -9600 + (ID) 2550
Total energy: -205016.0 ( -86.50 by residue)
QMean score : 0.501
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