Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPSATVAPVKRIPYAEASRALLRDSVLDAMRDLLLTRDWSAITLSDVARAAGISRQTIYNEFGSRQGLAQGYALRLADRLVDNVHASLDANVGNFYEAFLQGFRSFFAESAADPLVISLLTGVAKPDLLQLITTDSAPIITRASARLAPAFTDTWVATTDNDANVLSRAIVRLCLSYVSMPPEADHDVAADLARLITPFAERHGVINVP
5F04 Chain:A ((32-91))
--------------------------AILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAV----LLTLLDRVVNQADMAL-------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5F04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37634 for 359 contacts (-104.8/contact) +
2D Compatibility (PS) -6526 + (NN) -2646 + (LL) 10820
1D Compatibility (HY) -6000 + (ID) 1100
Total energy: -43086.0 ( -120.02 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_5F04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5F04-query.scw
PDB file :
Tito_Scwrl_5F04.pdb
: