Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQQWVDCEFTGRDFRDEDLSRLHTERAM-FSECDFSGVNLAESQHRGSAFRNCTFERTTLWHSTFAQCSMLGSVFVACRLRPLTLDDVDFTLAVLGGNDLRGLNLTGCRLRETSLVDTDLRKCVLRGADLSGARTTGARLDDADLRGATVDPVLWRTASLVGARVD----VDQAVAFAAAHGLCLAGG
2J8K Chain:A ((15-195))-------VPRGSHMDVEKLRQLYAAGERDFSIVDLRGAVLENINLSGAILHGAMLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEGAILDEAVLNQANLKAANLEQAILSHANIREADLSEANLEAADLSGADLAIADLHQANLHQAALERANLTGANLEDANLEGTILEGG


General information:
TITO was launched using:
RESULT:

Template: 2J8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166452 for 1593 contacts (-104.5/contact) +
2D Compatibility (PS) -17549 + (NN) 3621 + (LL) 776
1D Compatibility (HY) -4800 + (ID) 2100
Total energy: -186504.0 ( -117.08 by residue)
QMean score : 0.360

(partial model without unconserved sides chains):
PDB file : Tito_2J8K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J8K-query.scw
PDB file : Tito_Scwrl_2J8K.pdb: