Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLVSEKEFLDLPLVSVAEIVRCRGPKVSVFPFDGTRRWFHLECNP-QYDDYQQAALRQSIRILKMLFEHGIETVISPIFSDDLLDRGDRYIVQALEGMALLANDEEILSFYKEHEVHVLFYGDYKKRLPSTAQGAAVVKSFDDLTISTSSNTEHRLCFGVFGN------DAAESVAQFSISWNE---THGKPPTRREIIEGYYGEYVDKADMFIGFGR-FSTFDFPLLSSGKTSLYFTVAPSYYMTETTLRRILYDHIYLRHFRPKPDYSAMSADQLNVLRNRYRAQPDRVFGVGCVHDGIWFAEG |
2VG0 Chain:A ((1-225)) | -----------------------DLPRHIAVLCDGNRRWARSAGYDDVSYGYR-MGAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEI--C-A-PANHWSVRTVGDLGLI------GEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYS------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111551 for 1712 contacts (-65.2/contact) +
2D Compatibility (PS) -24161 + (NN) -16851 + (LL) 5792
1D Compatibility (HY) -1600 + (ID) 2000
Total energy: -150371.0 ( -87.83 by residue)
QMean score : 0.386
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