Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEIEQAYRITESITRTAARNFYYGIRLLPREKRAALSAVYALGRRIDDVADGELAPETKI-TELDAIRKSLDNI------DD--------SSDPVLVALADAARRFPVPIA-MFAELIDGARMEIDWTG-CRDFDELIVYCRRGAGTIGKLCLSIFGPVS------TATSRYAEQLGIALQQTNILRDVREDFLNGRIYLPRDELDRLGVRLRL-DDTGALDDPDGRLAALLRFSADRAADWYSLGLRL---IPHLDRRSAACCAAMSGIYRRQLALIRASPAVVYDRRISLSGLKKAQVAAAALASSVTCGPAHGPLPADLGSHPSH |
| 3VJ8 Chain:A ((36-329)) | ---LSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIG--MAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPEN--IDL--AVQCLNELITNALHHIPDVITYLSRLRNQS--VFNFCAIPQVMAIATLAACY-NNQQVFKGAVKIRKGQAVTLMMDAT----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131994 for 2092 contacts (-63.1/contact) +
2D Compatibility (PS) -28469 + (NN) -6016 + (LL) 932
1D Compatibility (HY) -10400 + (ID) 2500
Total energy: -178447.0 ( -85.30 by residue)
QMean score : 0.458
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