Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSPAPVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVLVGASRKRFLGALLAGPDGVMRPTDGRDTATAVISALAALHGAWGVRVHDVRASVDAIKVVEAWMGAERIERDG
4D8Z Chain:B ((42-293))-------IMGILN------SDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGE---------SVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRD--------NMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLD------LPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIG--------


General information:
TITO was launched using:
RESULT:

Template: 4D8Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143051 for 2000 contacts (-71.5/contact) +
2D Compatibility (PS) -27174 + (NN) -21498 + (LL) 1500
1D Compatibility (HY) -20400 + (ID) 4800
Total energy: -215423.0 ( -107.71 by residue)
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_4D8Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D8Z-query.scw
PDB file : Tito_Scwrl_4D8Z.pdb: