Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MICFDDVSKVYAHGATAVDR-LTLEVPNGMLTVFVGPSGCGKTTALRMINRMVDPTSGTITVDGTDVST--VNAVKLRLGIGYVIQNAGLMPHQRVIDNVATVPV-LKGQPRRAARKAGYEVLERVGLDPKVATRYPAQLSGGEQQRVGVARALAADPPILLMDEPFSAVDPVVRHELQNEILRLQAELHKTIVFVTHDIDEALKLADLVAVFAPGGALAQYDETARLLSSPANDFVSKFIGLGRGYRWLQLFDAAGLPVRDIEQVSVNGLSDARDRQVRDGWVLVVDGAGAPLGWIDADGRRRHRGGAALSDAMTVGGSVFRPNGNLSQALDAALSSPSGVGVAVDGGGKVIGGILAADVLAEFQKGKKAGGGAKPCTT |
| 4YMU Chain:A ((1-237)) | MIFVNDVYKNF--GSLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGVKINNGKVNINKVRQKVGMVFQHFNLFPHLTAIENITLAPVKVKKMNKKEAEELAVDLLAKVGLLDK-KDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANE-GMTMVVVTHEMGFAREVGDRV-IFMDDGVIVEEGTPEEIFYRAKNERTREFLS------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153086 for 1927 contacts (-79.4/contact) +
2D Compatibility (PS) -26105 + (NN) -16668 + (LL) 6356
1D Compatibility (HY) -20000 + (ID) 4350
Total energy: -213853.0 ( -110.98 by residue)
QMean score : 0.480
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