Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAYDVARVRGLHPSLGDGWVHFDAPAGMLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASSS---RAGLGYEVIVSRL-DDEANIAPWLRAAH--RYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWG--GPP-IGAMVFRDPSVMNSFGSVSTNPYAT--------------GPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSL---PLVMLIGRP--EAQIPVVSFAVHKVPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLA-HYSTMAEVDQLVRALASLG |
1QZ9 Chain:A ((15-399)) | ---SLAPLRQQFALP-EGVIYLDGNSLGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVD--------SPEELPQAIDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQ-LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQT--------------DMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP--EGYAVIQALIDRGVIGDYR-------------EPRIMRFGFTPLYTTFTEVWDAVQILGEIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -277828 for 3065 contacts (-90.6/contact) +
2D Compatibility (PS) -40063 + (NN) -29301 + (LL) 2520
1D Compatibility (HY) -14400 + (ID) 3200
Total energy: -362272.0 ( -118.20 by residue)
QMean score : 0.491
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